Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.09□□□□□ -0.31
Trub1Q8C0D0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trub1Q8C0D0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trub1Q8C0D0 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.08□□□□□ -0.31
Trub1Q8C0D0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.08□□□□□ -0.31
Trub1Q8C0D0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Trub1Q8C0D0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.08□□□□□ -0.31
Trub1Q8C0D0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.31
Trub1Q8C0D0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Gm11591-201ENSMUST00000120063 702 ntBASIC13.08□□□□□ -0.32
Trub1Q8C0D0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.08□□□□□ -0.32
Trub1Q8C0D0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trub1Q8C0D0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Gm6222-202ENSMUST00000182143 629 ntBASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Gm27731-201ENSMUST00000185192 107 ntBASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.07□□□□□ -0.32
Trub1Q8C0D0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms