Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Gm14999-201ENSMUST00000121039 624 ntBASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Gm8885-201ENSMUST00000189382 598 ntBASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Gm5363-201ENSMUST00000211927 938 ntBASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf2Q8BZT2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Gm14017-201ENSMUST00000121934 386 ntBASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Gm45186-201ENSMUST00000206874 478 ntBASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf2Q8BZT2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms