Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.48□□□□□ -0.25
Trerf1Q8BXJ2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trerf1Q8BXJ2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trerf1Q8BXJ2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trerf1Q8BXJ2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trerf1Q8BXJ2 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.48□□□□□ -0.25
Trerf1Q8BXJ2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trerf1Q8BXJ2 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Gm12390-201ENSMUST00000117897 397 ntBASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Gm7561-201ENSMUST00000211203 886 ntBASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.47□□□□□ -0.25
Trerf1Q8BXJ2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Proscos-202ENSMUST00000178990 666 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Gm27847-201ENSMUST00000183711 107 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Gm27375-201ENSMUST00000183799 107 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trerf1Q8BXJ2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms