Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Gm11425-201ENSMUST00000119608 498 ntBASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Gm13492-201ENSMUST00000119772 665 ntBASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Gm14760-201ENSMUST00000121831 999 ntBASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Gm18584-201ENSMUST00000203098 964 ntBASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Gm9396-201ENSMUST00000076703 567 ntBASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp43Q8BUM9 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Gm7809-201ENSMUST00000153199 742 ntBASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Usp43Q8BUM9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm12502-201ENSMUST00000120197 444 ntBASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm11964-201ENSMUST00000120982 444 ntBASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.84□□□□□ -0.35
Usp43Q8BUM9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms