Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 AC153506.1-201ENSMUST00000218768 2915 ntBASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Gm8213-201ENSMUST00000118191 441 ntBASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Gm6458-201ENSMUST00000211573 635 ntBASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc40Q8BI79 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Gm17794-201ENSMUST00000220252 955 ntBASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc40Q8BI79 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Ccdc40Q8BI79 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc40Q8BI79 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc40Q8BI79 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc40Q8BI79 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc40Q8BI79 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc40Q8BI79 Gm37368-201ENSMUST00000193173 3212 ntBASIC13.29□□□□□ -0.28
Ccdc40Q8BI79 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc40Q8BI79 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc40Q8BI79 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms