Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc5a7Q8BGY9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Slc5a7Q8BGY9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc5a7Q8BGY9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Slc5a7Q8BGY9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.09□□□□□ -0.63
Slc5a7Q8BGY9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms