Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp6nlQ80XC3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp6nlQ80XC3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Gm13813-201ENSMUST00000120998 787 ntBASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Gm17040-202ENSMUST00000170597 889 ntBASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Gm29787-201ENSMUST00000222129 849 ntBASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp6nlQ80XC3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp6nlQ80XC3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp6nlQ80XC3 Gm6198-201ENSMUST00000191337 2929 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms