Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Gm15547-201ENSMUST00000122152 333 ntBASIC12.16□□□□□ -0.46
Vrk1Q80X41 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 AA914427-201ENSMUST00000193194 1166 ntBASIC12.16□□□□□ -0.46
Vrk1Q80X41 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.16□□□□□ -0.46
Vrk1Q80X41 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.16□□□□□ -0.46
Vrk1Q80X41 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.15□□□□□ -0.46
Vrk1Q80X41 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Gm14130-201ENSMUST00000118417 987 ntBASIC12.15□□□□□ -0.46
Vrk1Q80X41 Gm12058-201ENSMUST00000118614 437 ntBASIC12.15□□□□□ -0.46
Vrk1Q80X41 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Gm27046-201ENSMUST00000182160 463 ntBASIC12.15□□□□□ -0.46
Vrk1Q80X41 Gm43138-201ENSMUST00000199123 708 ntBASIC12.15□□□□□ -0.46
Vrk1Q80X41 Gm3786-201ENSMUST00000202659 378 ntBASIC12.15□□□□□ -0.46
Vrk1Q80X41 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.15□□□□□ -0.46
Vrk1Q80X41 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vrk1Q80X41 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vrk1Q80X41 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.47
Vrk1Q80X41 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vrk1Q80X41 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Gm3096-201ENSMUST00000185770 364 ntBASIC12.14□□□□□ -0.47
Vrk1Q80X41 Gm45925-201ENSMUST00000218882 744 ntBASIC12.14□□□□□ -0.47
Vrk1Q80X41 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.14□□□□□ -0.47
Vrk1Q80X41 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.14□□□□□ -0.47
Vrk1Q80X41 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk1Q80X41 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms