Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm8463-201ENSMUST00000208573 613 ntBASIC12.77□□□□□ -0.37
Usp8Q80U87 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.77□□□□□ -0.37
Usp8Q80U87 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.77□□□□□ -0.37
Usp8Q80U87 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Usp8Q80U87 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Usp8Q80U87 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.77□□□□□ -0.37
Usp8Q80U87 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.76□□□□□ -0.37
Usp8Q80U87 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.76□□□□□ -0.37
Usp8Q80U87 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Gm44069-201ENSMUST00000204898 506 ntBASIC12.76□□□□□ -0.37
Usp8Q80U87 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp8Q80U87 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.76□□□□□ -0.37
Usp8Q80U87 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp8Q80U87 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Usp8Q80U87 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Usp8Q80U87 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.75□□□□□ -0.37
Usp8Q80U87 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.75□□□□□ -0.37
Usp8Q80U87 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Gm12928-201ENSMUST00000117115 573 ntBASIC12.75□□□□□ -0.37
Usp8Q80U87 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Usp8Q80U87 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp8Q80U87 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Usp8Q80U87 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.75□□□□□ -0.37
Usp8Q80U87 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.75□□□□□ -0.37
Usp8Q80U87 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp8Q80U87 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.75□□□□□ -0.37
Usp8Q80U87 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Usp8Q80U87 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.75□□□□□ -0.37
Usp8Q80U87 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Usp8Q80U87 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Usp8Q80U87 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp8Q80U87 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms