Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gm11918-201ENSMUST00000121660 179 ntBASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ctdp1Q7TSG2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm26315-201ENSMUST00000083890 321 ntBASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Ctdp1Q7TSG2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Gm11478-201ENSMUST00000117851 599 ntBASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.84□□□□□ -0.19
Ctdp1Q7TSG2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms