Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.34□□□□□ -0.75
Vma21Q78T54 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.34□□□□□ -0.75
Vma21Q78T54 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Vma21Q78T54 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Vma21Q78T54 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.33□□□□□ -0.76
Vma21Q78T54 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Gm12291-201ENSMUST00000121627 311 ntBASIC10.33□□□□□ -0.76
Vma21Q78T54 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Mir6392-201ENSMUST00000184924 108 ntBASIC10.33□□□□□ -0.76
Vma21Q78T54 Gm28693-202ENSMUST00000190758 331 ntBASIC10.33□□□□□ -0.76
Vma21Q78T54 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.33□□□□□ -0.76
Vma21Q78T54 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.33□□□□□ -0.76
Vma21Q78T54 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.33□□□□□ -0.76
Vma21Q78T54 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Gm18624-201ENSMUST00000220966 658 ntBASIC10.33□□□□□ -0.76
Vma21Q78T54 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Vma21Q78T54 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Vma21Q78T54 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.32□□□□□ -0.76
Vma21Q78T54 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.32□□□□□ -0.76
Vma21Q78T54 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.32□□□□□ -0.76
Vma21Q78T54 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Vma21Q78T54 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vma21Q78T54 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms