Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Mir6392-201ENSMUST00000184924 108 ntBASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Gm37917-201ENSMUST00000194711 392 ntBASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Gm18473-201ENSMUST00000220543 868 ntBASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Gm18624-201ENSMUST00000220966 658 ntBASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd3Q6P9Z1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd3Q6P9Z1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd3Q6P9Z1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd3Q6P9Z1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd3Q6P9Z1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd3Q6P9Z1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd3Q6P9Z1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Gm13813-201ENSMUST00000120998 787 ntBASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms