Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gm13384-201ENSMUST00000117166 1344 ntBASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gm13263-201ENSMUST00000121271 838 ntBASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gm23045-201ENSMUST00000175041 96 ntBASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gm43186-201ENSMUST00000198130 824 ntBASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gm18636-201ENSMUST00000218846 1066 ntBASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gm42863-201ENSMUST00000197875 2958 ntBASIC19.19■□□□□ 0.66
Slx4Q6P1D7 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gm42629-201ENSMUST00000199063 1102 ntBASIC19.19■□□□□ 0.66
Slx4Q6P1D7 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC19.19■□□□□ 0.66
Slx4Q6P1D7 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Gm8325-201ENSMUST00000099086 453 ntBASIC19.19■□□□□ 0.66
Slx4Q6P1D7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Gm43045-201ENSMUST00000198725 2095 ntBASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Gm14760-201ENSMUST00000121831 999 ntBASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Slx4Q6P1D7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Gm8731-201ENSMUST00000118088 412 ntBASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Gm11956-201ENSMUST00000119525 512 ntBASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Gm7722-201ENSMUST00000120646 741 ntBASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Gm42518-201ENSMUST00000196277 938 ntBASIC19.17■□□□□ 0.66
Slx4Q6P1D7 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 AC154305.4-201ENSMUST00000224520 614 ntBASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slx4Q6P1D7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 n-R5s64-201ENSMUST00000102019 119 ntBASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Gm12164-201ENSMUST00000121695 551 ntBASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Slx4Q6P1D7 Gm44270-201ENSMUST00000203084 1234 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms