Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Gm12928-201ENSMUST00000117115 573 ntBASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Gm12138-201ENSMUST00000122180 951 ntBASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Gm28911-201ENSMUST00000188837 117 ntBASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt39Q6IFX4 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Gm8805-201ENSMUST00000117848 313 ntBASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Gm14704-201ENSMUST00000120300 874 ntBASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Gm13123-201ENSMUST00000122173 492 ntBASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Krt39Q6IFX4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Gm8463-201ENSMUST00000208573 613 ntBASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Gm8598-201ENSMUST00000221184 836 ntBASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt39Q6IFX4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14□□□□□ -0.17
Krt39Q6IFX4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms