Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 AC154527.2-201ENSMUST00000225256 1466 ntBASIC9.39□□□□□ -0.91
Ss18Q62280 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC9.39□□□□□ -0.91
Ss18Q62280 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.38□□□□□ -0.91
Ss18Q62280 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Ss18Q62280 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ss18Q62280 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Ss18Q62280 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Ldha-ps-201ENSMUST00000119390 995 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.38□□□□□ -0.91
Ss18Q62280 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.38□□□□□ -0.91
Ss18Q62280 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.38□□□□□ -0.91
Ss18Q62280 Gm28631-201ENSMUST00000190740 334 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.38□□□□□ -0.91
Ss18Q62280 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Ss18Q62280 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.38□□□□□ -0.91
Ss18Q62280 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC9.38□□□□□ -0.91
Ss18Q62280 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 Gm6218-201ENSMUST00000219812 628 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Ss18Q62280 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.38□□□□□ -0.91
Ss18Q62280 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Ss18Q62280 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ss18Q62280 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.38□□□□□ -0.91
Ss18Q62280 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
Ss18Q62280 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ss18Q62280 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ss18Q62280 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.37□□□□□ -0.91
Ss18Q62280 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.37□□□□□ -0.91
Ss18Q62280 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.37□□□□□ -0.91
Ss18Q62280 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Ss18Q62280 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ss18Q62280 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.37□□□□□ -0.91
Ss18Q62280 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Ss18Q62280 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ss18Q62280 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms