Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim27Q62158 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim27Q62158 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim27Q62158 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim27Q62158 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim27Q62158 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim27Q62158 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim27Q62158 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.57■□□□□ 0.08
Trim27Q62158 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim27Q62158 Gm9630-201ENSMUST00000178304 885 ntBASIC15.57■□□□□ 0.08
Trim27Q62158 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim27Q62158 Gm43433-201ENSMUST00000196573 481 ntBASIC15.57■□□□□ 0.08
Trim27Q62158 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.57■□□□□ 0.08
Trim27Q62158 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.57■□□□□ 0.08
Trim27Q62158 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim27Q62158 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.57■□□□□ 0.08
Trim27Q62158 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim27Q62158 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim27Q62158 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim27Q62158 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim27Q62158 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim27Q62158 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.56■□□□□ 0.08
Trim27Q62158 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim27Q62158 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim27Q62158 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim27Q62158 Gm16379-201ENSMUST00000161469 348 ntBASIC15.56■□□□□ 0.08
Trim27Q62158 Gm8018-201ENSMUST00000173536 789 ntBASIC15.56■□□□□ 0.08
Trim27Q62158 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Gm8762-201ENSMUST00000193486 339 ntBASIC15.56■□□□□ 0.08
Trim27Q62158 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim27Q62158 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.56■□□□□ 0.08
Trim27Q62158 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Trim27Q62158 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.56■□□□□ 0.08
Trim27Q62158 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim27Q62158 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim27Q62158 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.55■□□□□ 0.08
Trim27Q62158 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim27Q62158 Gm13315-201ENSMUST00000120376 991 ntBASIC15.55■□□□□ 0.08
Trim27Q62158 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.55■□□□□ 0.08
Trim27Q62158 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim27Q62158 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.55■□□□□ 0.08
Trim27Q62158 Rmrp-201ENSMUST00000157463 271 ntBASIC15.55■□□□□ 0.08
Trim27Q62158 Snora78-201ENSMUST00000158630 128 ntBASIC15.55■□□□□ 0.08
Trim27Q62158 Gm24548-201ENSMUST00000158650 108 ntBASIC15.55■□□□□ 0.08
Trim27Q62158 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim27Q62158 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.55■□□□□ 0.08
Trim27Q62158 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.55■□□□□ 0.08
Trim27Q62158 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trim27Q62158 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim27Q62158 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim27Q62158 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim27Q62158 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim27Q62158 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim27Q62158 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim27Q62158 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim27Q62158 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms