Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Gli3Q61602 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.64■□□□□ 0.26
Gli3Q61602 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
Gli3Q61602 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC16.64■□□□□ 0.25
Gli3Q61602 Gm4462-201ENSMUST00000166453 492 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 Gm43852-201ENSMUST00000202098 917 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 Gm2448-201ENSMUST00000207080 559 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 Gm8436-201ENSMUST00000210152 1080 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 Gm5749-201ENSMUST00000210673 1090 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC16.64■□□□□ 0.25
Gli3Q61602 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Gm6564-201ENSMUST00000075377 619 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Gli3Q61602 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Gli3Q61602 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.64■□□□□ 0.25
Gli3Q61602 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC16.64■□□□□ 0.25
Gli3Q61602 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
Gli3Q61602 Gm24279-201ENSMUST00000104236 131 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 Gm13445-201ENSMUST00000121664 307 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 Gm7150-201ENSMUST00000122032 981 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC16.64■□□□□ 0.25
Gli3Q61602 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC16.64■□□□□ 0.25
Gli3Q61602 Gm29808-201ENSMUST00000194419 468 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 Gm9204-201ENSMUST00000212641 947 ntBASIC16.64■□□□□ 0.25
Gli3Q61602 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC16.64■□□□□ 0.25
Gli3Q61602 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Gli3Q61602 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gli3Q61602 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Gli3Q61602 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Mir432-201ENSMUST00000157230 75 ntBASIC16.63■□□□□ 0.25
Gli3Q61602 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.63■□□□□ 0.25
Gli3Q61602 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 Gm23105-201ENSMUST00000083719 134 ntBASIC16.63■□□□□ 0.25
Gli3Q61602 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.63■□□□□ 0.25
Gli3Q61602 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli3Q61602 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC16.62■□□□□ 0.25
Gli3Q61602 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.62■□□□□ 0.25
Gli3Q61602 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Gli3Q61602 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC16.62■□□□□ 0.25
Gli3Q61602 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Gm11996-201ENSMUST00000117538 915 ntBASIC16.62■□□□□ 0.25
Gli3Q61602 Gm14993-201ENSMUST00000121180 164 ntBASIC16.62■□□□□ 0.25
Gli3Q61602 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gli3Q61602 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC16.62■□□□□ 0.25
Gli3Q61602 Gm45094-201ENSMUST00000207013 617 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms