Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Gm24231-201ENSMUST00000104315 133 ntBASIC10.58□□□□□ -0.72
Hcfc1Q61191 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.58□□□□□ -0.72
Hcfc1Q61191 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hcfc1Q61191 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 Gm7666-201ENSMUST00000146631 819 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Gm8100-201ENSMUST00000182906 988 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 Ginm1-202ENSMUST00000065124 300 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 Gm11511-201ENSMUST00000118146 540 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hcfc1Q61191 Gm10288-201ENSMUST00000084614 537 ntBASIC10.57□□□□□ -0.72
Hcfc1Q61191 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hcfc1Q61191 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Hcfc1Q61191 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms