Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usf1Q61069 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usf1Q61069 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.57□□□□□ -0.56
Usf1Q61069 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usf1Q61069 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usf1Q61069 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usf1Q61069 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usf1Q61069 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usf1Q61069 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usf1Q61069 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usf1Q61069 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usf1Q61069 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usf1Q61069 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usf1Q61069 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usf1Q61069 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usf1Q61069 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Usf1Q61069 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Usf1Q61069 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
Usf1Q61069 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.56□□□□□ -0.56
Usf1Q61069 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Usf1Q61069 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Usf1Q61069 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Usf1Q61069 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.56□□□□□ -0.56
Usf1Q61069 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.56□□□□□ -0.56
Usf1Q61069 Gm43058-201ENSMUST00000197645 625 ntBASIC11.56□□□□□ -0.56
Usf1Q61069 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.56□□□□□ -0.56
Usf1Q61069 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Usf1Q61069 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.56□□□□□ -0.56
Usf1Q61069 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.56□□□□□ -0.56
Usf1Q61069 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.56□□□□□ -0.56
Usf1Q61069 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usf1Q61069 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Usf1Q61069 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Usf1Q61069 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Usf1Q61069 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Usf1Q61069 Gm14644-201ENSMUST00000116671 647 ntBASIC11.55□□□□□ -0.56
Usf1Q61069 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.55□□□□□ -0.56
Usf1Q61069 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.55□□□□□ -0.56
Usf1Q61069 Gm19353-201ENSMUST00000184561 445 ntBASIC11.55□□□□□ -0.56
Usf1Q61069 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.55□□□□□ -0.56
Usf1Q61069 Gm45219-201ENSMUST00000205602 465 ntBASIC11.55□□□□□ -0.56
Usf1Q61069 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Gm39404-201ENSMUST00000216350 313 ntBASIC11.55□□□□□ -0.56
Usf1Q61069 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.55□□□□□ -0.56
Usf1Q61069 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.55□□□□□ -0.56
Usf1Q61069 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.55□□□□□ -0.56
Usf1Q61069 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Gm10076-201ENSMUST00000073238 384 ntBASIC11.55□□□□□ -0.56
Usf1Q61069 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Usf1Q61069 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Usf1Q61069 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usf1Q61069 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Usf1Q61069 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms