Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Foxd4Q60688 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Foxd4Q60688 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.39□□□□□ -0.27
Foxd4Q60688 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC13.39□□□□□ -0.27
Foxd4Q60688 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Gm12091-201ENSMUST00000146791 830 ntBASIC13.39□□□□□ -0.27
Foxd4Q60688 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Gm28631-201ENSMUST00000190740 334 ntBASIC13.39□□□□□ -0.27
Foxd4Q60688 Gm8515-201ENSMUST00000194852 576 ntBASIC13.39□□□□□ -0.27
Foxd4Q60688 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Gm44719-201ENSMUST00000206404 149 ntBASIC13.39□□□□□ -0.27
Foxd4Q60688 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Gm45384-201ENSMUST00000210451 277 ntBASIC13.39□□□□□ -0.27
Foxd4Q60688 AC154245.1-201ENSMUST00000224615 601 ntBASIC13.39□□□□□ -0.27
Foxd4Q60688 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.39□□□□□ -0.27
Foxd4Q60688 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.39□□□□□ -0.27
Foxd4Q60688 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxd4Q60688 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.39□□□□□ -0.27
Foxd4Q60688 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Foxd4Q60688 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.38□□□□□ -0.27
Foxd4Q60688 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.38□□□□□ -0.27
Foxd4Q60688 Gm15376-201ENSMUST00000122258 783 ntBASIC13.38□□□□□ -0.27
Foxd4Q60688 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.38□□□□□ -0.27
Foxd4Q60688 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.38□□□□□ -0.27
Foxd4Q60688 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.38□□□□□ -0.27
Foxd4Q60688 Gm43997-201ENSMUST00000203986 1005 ntBASIC13.38□□□□□ -0.27
Foxd4Q60688 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Foxd4Q60688 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Foxd4Q60688 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.38□□□□□ -0.27
Foxd4Q60688 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxd4Q60688 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Foxd4Q60688 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.37□□□□□ -0.27
Foxd4Q60688 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Gm28760-201ENSMUST00000185995 736 ntBASIC13.37□□□□□ -0.27
Foxd4Q60688 Gm43094-201ENSMUST00000196549 921 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms