Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ClpbQ60649 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ClpbQ60649 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.21□□□□□ -0.45
ClpbQ60649 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
ClpbQ60649 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Gm13392-201ENSMUST00000117708 150 ntBASIC12.21□□□□□ -0.45
ClpbQ60649 Gm11637-201ENSMUST00000120601 592 ntBASIC12.21□□□□□ -0.45
ClpbQ60649 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Gm28693-202ENSMUST00000190758 331 ntBASIC12.21□□□□□ -0.45
ClpbQ60649 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.21□□□□□ -0.45
ClpbQ60649 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ClpbQ60649 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ClpbQ60649 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ClpbQ60649 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
ClpbQ60649 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.21□□□□□ -0.46
ClpbQ60649 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
ClpbQ60649 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
ClpbQ60649 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.2□□□□□ -0.46
ClpbQ60649 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.2□□□□□ -0.46
ClpbQ60649 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Mir686-201ENSMUST00000102174 109 ntBASIC12.2□□□□□ -0.46
ClpbQ60649 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
ClpbQ60649 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.2□□□□□ -0.46
ClpbQ60649 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.2□□□□□ -0.46
ClpbQ60649 Gm16479-201ENSMUST00000121706 932 ntBASIC12.2□□□□□ -0.46
ClpbQ60649 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.2□□□□□ -0.46
ClpbQ60649 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Gm27572-201ENSMUST00000183702 255 ntBASIC12.2□□□□□ -0.46
ClpbQ60649 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.2□□□□□ -0.46
ClpbQ60649 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.2□□□□□ -0.46
ClpbQ60649 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.2□□□□□ -0.46
ClpbQ60649 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
ClpbQ60649 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ClpbQ60649 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ClpbQ60649 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ClpbQ60649 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
ClpbQ60649 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
ClpbQ60649 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.19□□□□□ -0.46
ClpbQ60649 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ClpbQ60649 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.19□□□□□ -0.46
ClpbQ60649 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.19□□□□□ -0.46
ClpbQ60649 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.19□□□□□ -0.46
ClpbQ60649 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
ClpbQ60649 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ClpbQ60649 Gm5187-201ENSMUST00000117317 991 ntBASIC12.19□□□□□ -0.46
ClpbQ60649 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.19□□□□□ -0.46
ClpbQ60649 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.19□□□□□ -0.46
ClpbQ60649 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ClpbQ60649 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
ClpbQ60649 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.19□□□□□ -0.46
ClpbQ60649 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
ClpbQ60649 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.19□□□□□ -0.46
ClpbQ60649 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClpbQ60649 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ClpbQ60649 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms