Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prdm1Q60636 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prdm1Q60636 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prdm1Q60636 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prdm1Q60636 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prdm1Q60636 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Prdm1Q60636 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.83□□□□□ -0.04
Prdm1Q60636 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prdm1Q60636 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prdm1Q60636 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Prdm1Q60636 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Prdm1Q60636 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.82□□□□□ -0.04
Prdm1Q60636 Gm11964-201ENSMUST00000120982 444 ntBASIC14.82□□□□□ -0.04
Prdm1Q60636 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.82□□□□□ -0.04
Prdm1Q60636 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Mir8109-201ENSMUST00000184375 117 ntBASIC14.82□□□□□ -0.04
Prdm1Q60636 Olfr284-202ENSMUST00000206647 966 ntBASIC14.82□□□□□ -0.04
Prdm1Q60636 Gm6013-201ENSMUST00000212264 699 ntBASIC14.82□□□□□ -0.04
Prdm1Q60636 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Prdm1Q60636 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.82□□□□□ -0.04
Prdm1Q60636 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Prdm1Q60636 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Prdm1Q60636 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.82□□□□□ -0.04
Prdm1Q60636 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Prdm1Q60636 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prdm1Q60636 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Gm13492-201ENSMUST00000119772 665 ntBASIC14.81□□□□□ -0.04
Prdm1Q60636 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.81□□□□□ -0.04
Prdm1Q60636 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.81□□□□□ -0.04
Prdm1Q60636 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Gm5904-201ENSMUST00000210286 865 ntBASIC14.81□□□□□ -0.04
Prdm1Q60636 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.81□□□□□ -0.04
Prdm1Q60636 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.81□□□□□ -0.04
Prdm1Q60636 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.81□□□□□ -0.04
Prdm1Q60636 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.81□□□□□ -0.04
Prdm1Q60636 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.81□□□□□ -0.04
Prdm1Q60636 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Prdm1Q60636 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prdm1Q60636 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prdm1Q60636 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prdm1Q60636 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prdm1Q60636 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prdm1Q60636 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prdm1Q60636 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prdm1Q60636 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prdm1Q60636 Gm13875-201ENSMUST00000120162 282 ntBASIC14.8□□□□□ -0.04
Prdm1Q60636 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.8□□□□□ -0.04
Prdm1Q60636 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.8□□□□□ -0.04
Prdm1Q60636 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Prdm1Q60636 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.8□□□□□ -0.04
Prdm1Q60636 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.8□□□□□ -0.04
Prdm1Q60636 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.8□□□□□ -0.04
Prdm1Q60636 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Prdm1Q60636 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Prdm1Q60636 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prdm1Q60636 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Prdm1Q60636 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prdm1Q60636 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prdm1Q60636 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms