Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shroom1Q5SX79 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shroom1Q5SX79 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm24830-201ENSMUST00000102024 166 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm25890-201ENSMUST00000177643 165 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm22614-201ENSMUST00000178300 165 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm2383-201ENSMUST00000181461 807 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm22042-201ENSMUST00000082989 165 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm26232-201ENSMUST00000083360 166 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm24136-201ENSMUST00000083374 165 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm26110-201ENSMUST00000083971 165 ntBASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shroom1Q5SX79 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gm5904-201ENSMUST00000210286 865 ntBASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gm13097-201ENSMUST00000210722 397 ntBASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shroom1Q5SX79 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Gm12291-201ENSMUST00000121627 311 ntBASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Gm23363-201ENSMUST00000175024 79 ntBASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Gm2546-201ENSMUST00000182630 991 ntBASIC13.5□□□□□ -0.25
Shroom1Q5SX79 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms