Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc88aQ5SNZ0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc88aQ5SNZ0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc88aQ5SNZ0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc88aQ5SNZ0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm38210-201ENSMUST00000191944 809 ntBASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm44651-201ENSMUST00000207343 372 ntBASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm13996-201ENSMUST00000118456 430 ntBASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm12266-201ENSMUST00000120311 962 ntBASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm18730-201ENSMUST00000218038 343 ntBASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm45925-201ENSMUST00000218882 744 ntBASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm8712-201ENSMUST00000221090 701 ntBASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm15703-201ENSMUST00000120250 880 ntBASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm5369-201ENSMUST00000217499 588 ntBASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Gzmn-202ENSMUST00000225535 989 ntBASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc88aQ5SNZ0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms