Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Gm11637-201ENSMUST00000120601 592 ntBASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Gm37042-201ENSMUST00000193816 581 ntBASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Gm6091-201ENSMUST00000098307 165 ntBASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav5d-4Q5R1F6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Gm4271-201ENSMUST00000174444 973 ntBASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Gm23363-201ENSMUST00000175024 79 ntBASIC10.9□□□□□ -0.66
Trav5d-4Q5R1F6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms