Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm5523-201ENSMUST00000180415 997 ntBASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Matn2-206ENSMUST00000228570 2798 ntBASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Gm18730-201ENSMUST00000218038 343 ntBASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upf3aQ3ULJ3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upf3aQ3ULJ3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upf3aQ3ULJ3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Upf3aQ3ULJ3 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.33□□□□□ -0.27
Upf3aQ3ULJ3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upf3aQ3ULJ3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.33□□□□□ -0.27
Upf3aQ3ULJ3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upf3aQ3ULJ3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upf3aQ3ULJ3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms