Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chrna5Q2MKA5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chrna5Q2MKA5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm12501-201ENSMUST00000119163 529 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm25881-201ENSMUST00000157783 103 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm18304-201ENSMUST00000189162 546 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm43962-201ENSMUST00000203898 190 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm45219-201ENSMUST00000205602 465 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm17827-201ENSMUST00000211825 742 ntBASIC15.02■□□□□ -0
Chrna5Q2MKA5 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.02■□□□□ -0
Chrna5Q2MKA5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.02□□□□□ -0.01
Chrna5Q2MKA5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna5Q2MKA5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna5Q2MKA5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna5Q2MKA5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna5Q2MKA5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna5Q2MKA5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna5Q2MKA5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.02□□□□□ -0.01
Chrna5Q2MKA5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna5Q2MKA5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna5Q2MKA5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gm11941-201ENSMUST00000119904 610 ntBASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gm5733-201ENSMUST00000190232 939 ntBASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gm18038-201ENSMUST00000197900 485 ntBASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gm43916-201ENSMUST00000205062 967 ntBASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna5Q2MKA5 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Gm30238-201ENSMUST00000195528 2603 ntBASIC15□□□□□ -0.01
Chrna5Q2MKA5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chrna5Q2MKA5 Gm22133-201ENSMUST00000102082 109 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms