Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tff1Q08423 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.58□□□□□ -0.72
Tff1Q08423 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.58□□□□□ -0.72
Tff1Q08423 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tff1Q08423 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tff1Q08423 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tff1Q08423 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tff1Q08423 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tff1Q08423 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Tff1Q08423 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.57□□□□□ -0.72
Tff1Q08423 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tff1Q08423 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.57□□□□□ -0.72
Tff1Q08423 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tff1Q08423 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.57□□□□□ -0.72
Tff1Q08423 Gm27731-201ENSMUST00000185192 107 ntBASIC10.57□□□□□ -0.72
Tff1Q08423 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.57□□□□□ -0.72
Tff1Q08423 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tff1Q08423 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.57□□□□□ -0.72
Tff1Q08423 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.57□□□□□ -0.72
Tff1Q08423 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Tff1Q08423 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.57□□□□□ -0.72
Tff1Q08423 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tff1Q08423 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tff1Q08423 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tff1Q08423 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tff1Q08423 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tff1Q08423 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tff1Q08423 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.56□□□□□ -0.72
Tff1Q08423 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.56□□□□□ -0.72
Tff1Q08423 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.56□□□□□ -0.72
Tff1Q08423 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.56□□□□□ -0.72
Tff1Q08423 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm14660-201ENSMUST00000119809 575 ntBASIC10.56□□□□□ -0.72
Tff1Q08423 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.56□□□□□ -0.72
Tff1Q08423 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm27572-201ENSMUST00000183702 255 ntBASIC10.56□□□□□ -0.72
Tff1Q08423 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.56□□□□□ -0.72
Tff1Q08423 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.56□□□□□ -0.72
Tff1Q08423 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.56□□□□□ -0.72
Tff1Q08423 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm9257-201ENSMUST00000221254 232 ntBASIC10.56□□□□□ -0.72
Tff1Q08423 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.56□□□□□ -0.72
Tff1Q08423 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Tff1Q08423 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tff1Q08423 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms