Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Daam2-202ENSMUST00000224595 1926 ntBASIC12.5□□□□□ -0.41
Sox4Q06831 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Sox4Q06831 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox4Q06831 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox4Q06831 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.5□□□□□ -0.41
Sox4Q06831 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sox4Q06831 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox4Q06831 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.5□□□□□ -0.41
Sox4Q06831 Gm13786-201ENSMUST00000122371 333 ntBASIC12.5□□□□□ -0.41
Sox4Q06831 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Gm13316-201ENSMUST00000140537 691 ntBASIC12.5□□□□□ -0.41
Sox4Q06831 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.5□□□□□ -0.41
Sox4Q06831 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.5□□□□□ -0.41
Sox4Q06831 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.5□□□□□ -0.41
Sox4Q06831 Gm29396-201ENSMUST00000185659 716 ntBASIC12.5□□□□□ -0.41
Sox4Q06831 Gm6007-201ENSMUST00000208170 823 ntBASIC12.5□□□□□ -0.41
Sox4Q06831 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sox4Q06831 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox4Q06831 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Sox4Q06831 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.5□□□□□ -0.41
Sox4Q06831 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sox4Q06831 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox4Q06831 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox4Q06831 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Sox4Q06831 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Sox4Q06831 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sox4Q06831 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.49□□□□□ -0.41
Sox4Q06831 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Mir1247-201ENSMUST00000116706 82 ntBASIC12.49□□□□□ -0.41
Sox4Q06831 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.49□□□□□ -0.41
Sox4Q06831 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.49□□□□□ -0.41
Sox4Q06831 Mospd4-201ENSMUST00000180618 576 ntBASIC12.49□□□□□ -0.41
Sox4Q06831 Mir8109-201ENSMUST00000184375 117 ntBASIC12.49□□□□□ -0.41
Sox4Q06831 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.49□□□□□ -0.41
Sox4Q06831 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.49□□□□□ -0.41
Sox4Q06831 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.49□□□□□ -0.41
Sox4Q06831 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.49□□□□□ -0.41
Sox4Q06831 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sox4Q06831 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox4Q06831 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Sox4Q06831 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox4Q06831 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox4Q06831 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox4Q06831 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms