Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VcpQ01853 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Gm45186-201ENSMUST00000206874 478 ntBASIC13.59□□□□□ -0.23
VcpQ01853 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.59□□□□□ -0.23
VcpQ01853 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.59□□□□□ -0.23
VcpQ01853 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.59□□□□□ -0.23
VcpQ01853 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Gm10146-201ENSMUST00000072739 309 ntBASIC13.59□□□□□ -0.23
VcpQ01853 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VcpQ01853 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
VcpQ01853 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.59□□□□□ -0.23
VcpQ01853 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VcpQ01853 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VcpQ01853 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
VcpQ01853 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
VcpQ01853 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
VcpQ01853 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
VcpQ01853 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VcpQ01853 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
VcpQ01853 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
VcpQ01853 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.58□□□□□ -0.24
VcpQ01853 Gm12566-201ENSMUST00000121479 359 ntBASIC13.58□□□□□ -0.24
VcpQ01853 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
VcpQ01853 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VcpQ01853 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
VcpQ01853 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.58□□□□□ -0.24
VcpQ01853 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.58□□□□□ -0.24
VcpQ01853 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VcpQ01853 Gm37922-201ENSMUST00000195596 455 ntBASIC13.58□□□□□ -0.24
VcpQ01853 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.58□□□□□ -0.24
VcpQ01853 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.58□□□□□ -0.24
VcpQ01853 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.58□□□□□ -0.24
VcpQ01853 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Gm16372-201ENSMUST00000073088 450 ntBASIC13.58□□□□□ -0.24
VcpQ01853 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.58□□□□□ -0.24
VcpQ01853 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
VcpQ01853 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VcpQ01853 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.58□□□□□ -0.24
VcpQ01853 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.58□□□□□ -0.24
VcpQ01853 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VcpQ01853 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
VcpQ01853 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
VcpQ01853 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.57□□□□□ -0.24
VcpQ01853 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
VcpQ01853 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VcpQ01853 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
VcpQ01853 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VcpQ01853 Gm16202-201ENSMUST00000117532 544 ntBASIC13.57□□□□□ -0.24
VcpQ01853 Gm4909-201ENSMUST00000118749 794 ntBASIC13.57□□□□□ -0.24
VcpQ01853 Gm13123-201ENSMUST00000122173 492 ntBASIC13.57□□□□□ -0.24
VcpQ01853 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.57□□□□□ -0.24
VcpQ01853 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.57□□□□□ -0.24
VcpQ01853 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.57□□□□□ -0.24
VcpQ01853 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VcpQ01853 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.57□□□□□ -0.24
VcpQ01853 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms