Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.95□□□□□ -0.34
Thumpd3P97770 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.94□□□□□ -0.34
Thumpd3P97770 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.94□□□□□ -0.34
Thumpd3P97770 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Thumpd3P97770 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Thumpd3P97770 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.94□□□□□ -0.34
Thumpd3P97770 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Thumpd3P97770 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.94□□□□□ -0.34
Thumpd3P97770 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Thumpd3P97770 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.94□□□□□ -0.34
Thumpd3P97770 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.94□□□□□ -0.34
Thumpd3P97770 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.94□□□□□ -0.34
Thumpd3P97770 Gm6983-201ENSMUST00000214912 628 ntBASIC12.94□□□□□ -0.34
Thumpd3P97770 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.94□□□□□ -0.34
Thumpd3P97770 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Thumpd3P97770 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.94□□□□□ -0.34
Thumpd3P97770 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.94□□□□□ -0.34
Thumpd3P97770 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Thumpd3P97770 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Thumpd3P97770 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.93□□□□□ -0.34
Thumpd3P97770 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Thumpd3P97770 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.93□□□□□ -0.34
Thumpd3P97770 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.93□□□□□ -0.34
Thumpd3P97770 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.93□□□□□ -0.34
Thumpd3P97770 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Gm38223-201ENSMUST00000194484 695 ntBASIC12.93□□□□□ -0.34
Thumpd3P97770 Gm38671-201ENSMUST00000200573 130 ntBASIC12.93□□□□□ -0.34
Thumpd3P97770 Gm42550-201ENSMUST00000201553 960 ntBASIC12.93□□□□□ -0.34
Thumpd3P97770 Gm9899-201ENSMUST00000065519 555 ntBASIC12.93□□□□□ -0.34
Thumpd3P97770 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Thumpd3P97770 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Thumpd3P97770 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Thumpd3P97770 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.93□□□□□ -0.34
Thumpd3P97770 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Thumpd3P97770 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Thumpd3P97770 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms