Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm8459-201ENSMUST00000162504 760 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 AC238811.4-201ENSMUST00000178019 1246 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 AC238940.3-201ENSMUST00000178830 1246 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC8.36□□□□□ -1.07
PrkdcP97313 AC129975.1-201ENSMUST00000224816 592 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Gm44506-201ENSMUST00000206278 965 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC8.36□□□□□ -1.07
PrkdcP97313 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
PrkdcP97313 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PrkdcP97313 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PrkdcP97313 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PrkdcP97313 Gm6304-201ENSMUST00000096579 447 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Gm30238-201ENSMUST00000195528 2603 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Gm43045-201ENSMUST00000198725 2095 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC8.36□□□□□ -1.07
PrkdcP97313 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 Mir7221-201ENSMUST00000184009 72 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 Gm34379-201ENSMUST00000195036 290 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Gm6331-201ENSMUST00000217890 450 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 AC093022.5-201ENSMUST00000226841 1079 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
PrkdcP97313 Gm42863-201ENSMUST00000197875 2958 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm14270-201ENSMUST00000118388 846 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Gm14247-201ENSMUST00000120950 237 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
PrkdcP97313 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm43547-201ENSMUST00000197729 328 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PrkdcP97313 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
PrkdcP97313 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm23769-201ENSMUST00000104441 121 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Gm15626-201ENSMUST00000117478 868 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Gm12461-201ENSMUST00000120231 1239 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PrkdcP97313 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PrkdcP97313 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
PrkdcP97313 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC8.35□□□□□ -1.07
PrkdcP97313 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms