Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trim43cP86449 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim43cP86449 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim43cP86449 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Trim43cP86449 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim43cP86449 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim43cP86449 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim43cP86449 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim43cP86449 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim43cP86449 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Gm24231-201ENSMUST00000104315 133 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Gm8738-201ENSMUST00000172606 329 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Trim43cP86449 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim43cP86449 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim43cP86449 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.8□□□□□ -0.2
Trim43cP86449 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim43cP86449 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim43cP86449 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43cP86449 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.79□□□□□ -0.2
Trim43cP86449 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim43cP86449 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim43cP86449 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.79□□□□□ -0.2
Trim43cP86449 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim43cP86449 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim43cP86449 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim43cP86449 Gm13316-201ENSMUST00000140537 691 ntBASIC13.79□□□□□ -0.2
Trim43cP86449 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim43cP86449 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim43cP86449 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim43cP86449 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.79□□□□□ -0.2
Trim43cP86449 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim43cP86449 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43cP86449 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Trim43cP86449 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trim43cP86449 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim43cP86449 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43cP86449 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms