Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.53□□□□□ -0.4
Shox2P70390 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.53□□□□□ -0.4
Shox2P70390 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.53□□□□□ -0.4
Shox2P70390 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Shox2P70390 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.53□□□□□ -0.4
Shox2P70390 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.53□□□□□ -0.4
Shox2P70390 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.53□□□□□ -0.4
Shox2P70390 Gm27494-201ENSMUST00000184735 189 ntBASIC12.53□□□□□ -0.4
Shox2P70390 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.53□□□□□ -0.4
Shox2P70390 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Gm10175-201ENSMUST00000086013 645 ntBASIC12.53□□□□□ -0.4
Shox2P70390 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.53□□□□□ -0.4
Shox2P70390 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Shox2P70390 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Shox2P70390 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Shox2P70390 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shox2P70390 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shox2P70390 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shox2P70390 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shox2P70390 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.52□□□□□ -0.4
Shox2P70390 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shox2P70390 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.52□□□□□ -0.41
Shox2P70390 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Mir6990-201ENSMUST00000183724 91 ntBASIC12.52□□□□□ -0.41
Shox2P70390 Gm43125-201ENSMUST00000201724 730 ntBASIC12.52□□□□□ -0.41
Shox2P70390 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.52□□□□□ -0.41
Shox2P70390 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Shox2P70390 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.52□□□□□ -0.41
Shox2P70390 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.52□□□□□ -0.41
Shox2P70390 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.52□□□□□ -0.41
Shox2P70390 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Shox2P70390 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.52□□□□□ -0.41
Shox2P70390 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.52□□□□□ -0.41
Shox2P70390 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Shox2P70390 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Shox2P70390 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.51□□□□□ -0.41
Shox2P70390 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.51□□□□□ -0.41
Shox2P70390 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Shox2P70390 Gm26464-201ENSMUST00000157094 305 ntBASIC12.51□□□□□ -0.41
Shox2P70390 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.51□□□□□ -0.41
Shox2P70390 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Gm17795-201ENSMUST00000214505 757 ntBASIC12.51□□□□□ -0.41
Shox2P70390 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.51□□□□□ -0.41
Shox2P70390 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Shox2P70390 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shox2P70390 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
Shox2P70390 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.51□□□□□ -0.41
Shox2P70390 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Shox2P70390 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms