Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmgb1P63158 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Hmgb1P63158 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hmgb1P63158 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.01□□□□□ -0.17
Hmgb1P63158 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Gm11918-201ENSMUST00000121660 179 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmgb1P63158 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Hmgb1P63158 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmgb1P63158 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Hmgb1P63158 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Gm6180-201ENSMUST00000065243 498 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.01□□□□□ -0.17
Hmgb1P63158 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hmgb1P63158 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Gm45011-201ENSMUST00000207620 2297 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14□□□□□ -0.17
Hmgb1P63158 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hmgb1P63158 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hmgb1P63158 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hmgb1P63158 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14□□□□□ -0.17
Hmgb1P63158 Gm23984-201ENSMUST00000157139 203 ntBASIC14□□□□□ -0.17
Hmgb1P63158 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14□□□□□ -0.17
Hmgb1P63158 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14□□□□□ -0.17
Hmgb1P63158 Gm45484-201ENSMUST00000210310 1141 ntBASIC14□□□□□ -0.17
Hmgb1P63158 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Gm17794-201ENSMUST00000220252 955 ntBASIC14□□□□□ -0.17
Hmgb1P63158 AC110817.1-201ENSMUST00000225706 605 ntBASIC14□□□□□ -0.17
Hmgb1P63158 Gm2824-203ENSMUST00000226189 1228 ntBASIC14□□□□□ -0.17
Hmgb1P63158 AC154239.3-201ENSMUST00000226933 674 ntBASIC14□□□□□ -0.17
Hmgb1P63158 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hmgb1P63158 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Hmgb1P63158 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hmgb1P63158 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14□□□□□ -0.17
Hmgb1P63158 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14□□□□□ -0.17
Hmgb1P63158 Gm44292-201ENSMUST00000205194 2364 ntBASIC14□□□□□ -0.17
Hmgb1P63158 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgb1P63158 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Hmgb1P63158 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hmgb1P63158 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Hmgb1P63158 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Gm14704-201ENSMUST00000120300 874 ntBASIC13.99□□□□□ -0.17
Hmgb1P63158 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Gm23363-201ENSMUST00000175024 79 ntBASIC13.99□□□□□ -0.17
Hmgb1P63158 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.99□□□□□ -0.17
Hmgb1P63158 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.99□□□□□ -0.17
Hmgb1P63158 Gm37497-201ENSMUST00000195830 798 ntBASIC13.99□□□□□ -0.17
Hmgb1P63158 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.99□□□□□ -0.17
Hmgb1P63158 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hmgb1P63158 Gm45384-201ENSMUST00000210451 277 ntBASIC13.99□□□□□ -0.17
Hmgb1P63158 Gm9908-201ENSMUST00000211534 448 ntBASIC13.99□□□□□ -0.17
Hmgb1P63158 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hmgb1P63158 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms