Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.59□□□□□ -0.39
Crnkl1P63154 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.59□□□□□ -0.39
Crnkl1P63154 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Crnkl1P63154 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Crnkl1P63154 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Crnkl1P63154 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Crnkl1P63154 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.58□□□□□ -0.39
Crnkl1P63154 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.39
Crnkl1P63154 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Crnkl1P63154 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Crnkl1P63154 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Crnkl1P63154 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.58□□□□□ -0.4
Crnkl1P63154 Gm44855-201ENSMUST00000205725 362 ntBASIC12.58□□□□□ -0.4
Crnkl1P63154 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Crnkl1P63154 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Crnkl1P63154 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.58□□□□□ -0.4
Crnkl1P63154 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Crnkl1P63154 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.57□□□□□ -0.4
Crnkl1P63154 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Gm15321-201ENSMUST00000121290 288 ntBASIC12.57□□□□□ -0.4
Crnkl1P63154 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Gm7063-201ENSMUST00000186840 981 ntBASIC12.57□□□□□ -0.4
Crnkl1P63154 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.57□□□□□ -0.4
Crnkl1P63154 Gm10766-202ENSMUST00000194123 606 ntBASIC12.57□□□□□ -0.4
Crnkl1P63154 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.57□□□□□ -0.4
Crnkl1P63154 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Crnkl1P63154 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.57□□□□□ -0.4
Crnkl1P63154 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms