Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.55□□□□□ -0.56
Lsm3P62311 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Lsm3P62311 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Lsm3P62311 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.55□□□□□ -0.56
Lsm3P62311 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Lsm3P62311 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.54□□□□□ -0.56
Lsm3P62311 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.54□□□□□ -0.56
Lsm3P62311 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.54□□□□□ -0.56
Lsm3P62311 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.54□□□□□ -0.56
Lsm3P62311 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.54□□□□□ -0.56
Lsm3P62311 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Lsm3P62311 Mir1897-201ENSMUST00000122581 272 ntBASIC11.54□□□□□ -0.56
Lsm3P62311 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.54□□□□□ -0.56
Lsm3P62311 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Lsm3P62311 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.54□□□□□ -0.56
Lsm3P62311 Gm7063-201ENSMUST00000186840 981 ntBASIC11.54□□□□□ -0.56
Lsm3P62311 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.54□□□□□ -0.56
Lsm3P62311 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.54□□□□□ -0.56
Lsm3P62311 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.54□□□□□ -0.56
Lsm3P62311 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Lsm3P62311 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Lsm3P62311 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.54□□□□□ -0.56
Lsm3P62311 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lsm3P62311 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm3P62311 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Lsm3P62311 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Gm11745-201ENSMUST00000121669 448 ntBASIC11.53□□□□□ -0.56
Lsm3P62311 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm3P62311 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm3P62311 Gm28659-201ENSMUST00000188013 759 ntBASIC11.53□□□□□ -0.56
Lsm3P62311 Gm19184-201ENSMUST00000196798 928 ntBASIC11.53□□□□□ -0.56
Lsm3P62311 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm3P62311 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm3P62311 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.53□□□□□ -0.56
Lsm3P62311 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Lsm3P62311 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.53□□□□□ -0.56
Lsm3P62311 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm3P62311 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Lsm3P62311 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lsm3P62311 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.53□□□□□ -0.56
Lsm3P62311 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm3P62311 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm3P62311 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.52□□□□□ -0.56
Lsm3P62311 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.52□□□□□ -0.56
Lsm3P62311 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Lsm3P62311 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm3P62311 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm3P62311 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm3P62311 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Lsm3P62311 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm3P62311 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm3P62311 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Lsm3P62311 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms