Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Sec61a1P61620 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.21□□□□□ -0.61
Sec61a1P61620 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.21□□□□□ -0.61
Sec61a1P61620 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.21□□□□□ -0.61
Sec61a1P61620 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.21□□□□□ -0.61
Sec61a1P61620 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm6244-201ENSMUST00000178732 841 ntBASIC11.21□□□□□ -0.61
Sec61a1P61620 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.21□□□□□ -0.61
Sec61a1P61620 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.21□□□□□ -0.61
Sec61a1P61620 Mir7221-201ENSMUST00000184009 72 ntBASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm27839-201ENSMUST00000184242 106 ntBASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm27892-201ENSMUST00000185017 106 ntBASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.21□□□□□ -0.61
Sec61a1P61620 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.21□□□□□ -0.61
Sec61a1P61620 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61a1P61620 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Sec61a1P61620 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Sec61a1P61620 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sec61a1P61620 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sec61a1P61620 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sec61a1P61620 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Sec61a1P61620 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sec61a1P61620 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sec61a1P61620 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sec61a1P61620 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sec61a1P61620 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Sec61a1P61620 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Sec61a1P61620 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.2□□□□□ -0.62
Sec61a1P61620 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Gm12928-201ENSMUST00000117115 573 ntBASIC11.2□□□□□ -0.62
Sec61a1P61620 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.2□□□□□ -0.62
Sec61a1P61620 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Sec61a1P61620 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.2□□□□□ -0.62
Sec61a1P61620 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Gm29608-201ENSMUST00000190444 463 ntBASIC11.2□□□□□ -0.62
Sec61a1P61620 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Gm6983-201ENSMUST00000214912 628 ntBASIC11.2□□□□□ -0.62
Sec61a1P61620 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.2□□□□□ -0.62
Sec61a1P61620 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms