Protein–RNA interactions for Protein: P60229

Eif3e, Eukaryotic translation initiation factor 3 subunit E, mousemouse

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eif3eP60229 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.11□□□□□ -0.31
Eif3eP60229 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Eif3eP60229 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Eif3eP60229 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Eif3eP60229 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Eif3eP60229 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.11□□□□□ -0.31
Eif3eP60229 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.11□□□□□ -0.31
Eif3eP60229 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Eif3eP60229 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Eif3eP60229 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Eif3eP60229 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.11□□□□□ -0.31
Eif3eP60229 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Eif3eP60229 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.11□□□□□ -0.31
Eif3eP60229 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Eif3eP60229 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Eif3eP60229 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Eif3eP60229 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Eif3eP60229 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.1□□□□□ -0.31
Eif3eP60229 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.1□□□□□ -0.31
Eif3eP60229 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.1□□□□□ -0.31
Eif3eP60229 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Eif3eP60229 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.1□□□□□ -0.31
Eif3eP60229 Gm9002-201ENSMUST00000178437 499 ntBASIC13.1□□□□□ -0.31
Eif3eP60229 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.1□□□□□ -0.31
Eif3eP60229 Gm8099-201ENSMUST00000200510 742 ntBASIC13.1□□□□□ -0.31
Eif3eP60229 Gm9794-201ENSMUST00000202370 423 ntBASIC13.1□□□□□ -0.31
Eif3eP60229 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.1□□□□□ -0.31
Eif3eP60229 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.1□□□□□ -0.31
Eif3eP60229 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Eif3eP60229 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Eif3eP60229 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Eif3eP60229 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Eif3eP60229 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Eif3eP60229 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Eif3eP60229 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Eif3eP60229 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Eif3eP60229 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Gm11814-201ENSMUST00000119515 929 ntBASIC13.09□□□□□ -0.31
Eif3eP60229 Gm15806-201ENSMUST00000120696 955 ntBASIC13.09□□□□□ -0.31
Eif3eP60229 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.09□□□□□ -0.31
Eif3eP60229 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.09□□□□□ -0.31
Eif3eP60229 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.09□□□□□ -0.31
Eif3eP60229 Gm22331-201ENSMUST00000158066 136 ntBASIC13.09□□□□□ -0.31
Eif3eP60229 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.09□□□□□ -0.31
Eif3eP60229 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Eif3eP60229 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Eif3eP60229 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.09□□□□□ -0.31
Eif3eP60229 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.09□□□□□ -0.31
Eif3eP60229 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Eif3eP60229 Gm26035-201ENSMUST00000083065 308 ntBASIC13.09□□□□□ -0.31
Eif3eP60229 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms