Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.43□□□□□ -0.26
Shmt1P50431 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Shmt1P50431 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.42□□□□□ -0.26
Shmt1P50431 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.42□□□□□ -0.26
Shmt1P50431 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.42□□□□□ -0.26
Shmt1P50431 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.42□□□□□ -0.26
Shmt1P50431 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.42□□□□□ -0.26
Shmt1P50431 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Shmt1P50431 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.42□□□□□ -0.26
Shmt1P50431 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Gm10434-201ENSMUST00000101158 471 ntBASIC13.42□□□□□ -0.26
Shmt1P50431 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.42□□□□□ -0.26
Shmt1P50431 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Gm2546-201ENSMUST00000182630 991 ntBASIC13.42□□□□□ -0.26
Shmt1P50431 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.42□□□□□ -0.26
Shmt1P50431 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.42□□□□□ -0.26
Shmt1P50431 Gm4857-201ENSMUST00000192718 785 ntBASIC13.42□□□□□ -0.26
Shmt1P50431 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.42□□□□□ -0.26
Shmt1P50431 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.42□□□□□ -0.26
Shmt1P50431 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Shmt1P50431 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Shmt1P50431 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shmt1P50431 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Shmt1P50431 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.41□□□□□ -0.26
Shmt1P50431 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Shmt1P50431 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Gm25214-201ENSMUST00000104573 129 ntBASIC13.41□□□□□ -0.26
Shmt1P50431 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Shmt1P50431 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Gm11531-201ENSMUST00000117614 555 ntBASIC13.41□□□□□ -0.26
Shmt1P50431 Gm15703-201ENSMUST00000120250 880 ntBASIC13.41□□□□□ -0.26
Shmt1P50431 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.41□□□□□ -0.26
Shmt1P50431 Gm8018-201ENSMUST00000173536 789 ntBASIC13.41□□□□□ -0.26
Shmt1P50431 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.41□□□□□ -0.26
Shmt1P50431 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.41□□□□□ -0.26
Shmt1P50431 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.41□□□□□ -0.26
Shmt1P50431 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.41□□□□□ -0.26
Shmt1P50431 Gm5950-201ENSMUST00000213337 772 ntBASIC13.41□□□□□ -0.26
Shmt1P50431 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Shmt1P50431 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Shmt1P50431 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Shmt1P50431 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Shmt1P50431 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.41□□□□□ -0.26
Shmt1P50431 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Shmt1P50431 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shmt1P50431 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Shmt1P50431 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shmt1P50431 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shmt1P50431 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shmt1P50431 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.4□□□□□ -0.26
Shmt1P50431 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shmt1P50431 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms