Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.98□□□□□ -0.33
SftpbP50405 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.98□□□□□ -0.33
SftpbP50405 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.98□□□□□ -0.33
SftpbP50405 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.98□□□□□ -0.33
SftpbP50405 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.98□□□□□ -0.33
SftpbP50405 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.98□□□□□ -0.33
SftpbP50405 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SftpbP50405 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.98□□□□□ -0.33
SftpbP50405 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.98□□□□□ -0.33
SftpbP50405 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.98□□□□□ -0.33
SftpbP50405 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.98□□□□□ -0.33
SftpbP50405 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.98□□□□□ -0.33
SftpbP50405 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.98□□□□□ -0.33
SftpbP50405 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SftpbP50405 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.98□□□□□ -0.33
SftpbP50405 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SftpbP50405 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.97□□□□□ -0.33
SftpbP50405 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.97□□□□□ -0.33
SftpbP50405 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.97□□□□□ -0.33
SftpbP50405 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.97□□□□□ -0.33
SftpbP50405 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SftpbP50405 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Gm38671-201ENSMUST00000200573 130 ntBASIC12.97□□□□□ -0.33
SftpbP50405 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.97□□□□□ -0.33
SftpbP50405 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Gm45668-201ENSMUST00000211271 493 ntBASIC12.97□□□□□ -0.33
SftpbP50405 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.97□□□□□ -0.33
SftpbP50405 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.97□□□□□ -0.33
SftpbP50405 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.97□□□□□ -0.33
SftpbP50405 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SftpbP50405 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.97□□□□□ -0.33
SftpbP50405 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.97□□□□□ -0.33
SftpbP50405 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.97□□□□□ -0.33
SftpbP50405 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Cog3-203ENSMUST00000227473 4197 ntBASIC12.97□□□□□ -0.33
SftpbP50405 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SftpbP50405 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
SftpbP50405 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SftpbP50405 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
SftpbP50405 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SftpbP50405 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SftpbP50405 Gm12291-201ENSMUST00000121627 311 ntBASIC12.96□□□□□ -0.33
SftpbP50405 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SftpbP50405 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.96□□□□□ -0.33
SftpbP50405 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.96□□□□□ -0.33
SftpbP50405 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms