Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Chd1P40201 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC18.59■□□□□ 0.57
Chd1P40201 Gm17214-201ENSMUST00000164501 541 ntBASIC18.59■□□□□ 0.57
Chd1P40201 Gm24809-201ENSMUST00000175318 271 ntBASIC18.59■□□□□ 0.57
Chd1P40201 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Gm8436-201ENSMUST00000210152 1080 ntBASIC18.59■□□□□ 0.57
Chd1P40201 Gm5749-201ENSMUST00000210673 1090 ntBASIC18.59■□□□□ 0.57
Chd1P40201 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC18.59■□□□□ 0.57
Chd1P40201 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC18.59■□□□□ 0.57
Chd1P40201 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1P40201 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC18.58■□□□□ 0.57
Chd1P40201 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Chd1P40201 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1P40201 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1P40201 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Chd1P40201 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC18.58■□□□□ 0.57
Chd1P40201 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC18.58■□□□□ 0.57
Chd1P40201 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1P40201 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1P40201 Gm6108-201ENSMUST00000208365 367 ntBASIC18.58■□□□□ 0.57
Chd1P40201 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1P40201 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1P40201 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chd1P40201 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Chd1P40201 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Chd1P40201 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1P40201 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1P40201 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1P40201 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Chd1P40201 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Chd1P40201 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Chd1P40201 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1P40201 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd1P40201 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Chd1P40201 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 Gm11560-201ENSMUST00000117567 948 ntBASIC18.57■□□□□ 0.56
Chd1P40201 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC18.57■□□□□ 0.56
Chd1P40201 Gm43380-201ENSMUST00000200421 220 ntBASIC18.57■□□□□ 0.56
Chd1P40201 CT010486.3-201ENSMUST00000224555 811 ntBASIC18.57■□□□□ 0.56
Chd1P40201 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Chd1P40201 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.57■□□□□ 0.56
Chd1P40201 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC18.57■□□□□ 0.56
Chd1P40201 Gm14034-201ENSMUST00000120147 551 ntBASIC18.57■□□□□ 0.56
Chd1P40201 Gm22379-201ENSMUST00000157480 131 ntBASIC18.57■□□□□ 0.56
Chd1P40201 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC18.57■□□□□ 0.56
Chd1P40201 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC18.57■□□□□ 0.56
Chd1P40201 BC106175-202ENSMUST00000219344 1213 ntBASIC18.57■□□□□ 0.56
Chd1P40201 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC18.57■□□□□ 0.56
Chd1P40201 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chd1P40201 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
Chd1P40201 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd1P40201 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Chd1P40201 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC18.56■□□□□ 0.56
Chd1P40201 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Chd1P40201 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC18.56■□□□□ 0.56
Chd1P40201 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC18.56■□□□□ 0.56
Chd1P40201 Gm9673-201ENSMUST00000119287 781 ntBASIC18.56■□□□□ 0.56
Chd1P40201 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Gm15620-201ENSMUST00000122949 270 ntBASIC18.56■□□□□ 0.56
Chd1P40201 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms