Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.67□□□□□ -0.38
LdlrP35951 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.67□□□□□ -0.38
LdlrP35951 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.67□□□□□ -0.38
LdlrP35951 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.67□□□□□ -0.38
LdlrP35951 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LdlrP35951 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
LdlrP35951 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LdlrP35951 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LdlrP35951 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
LdlrP35951 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Daam2-202ENSMUST00000224595 1926 ntBASIC12.66□□□□□ -0.38
LdlrP35951 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LdlrP35951 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.66□□□□□ -0.38
LdlrP35951 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Gm12928-201ENSMUST00000117115 573 ntBASIC12.66□□□□□ -0.38
LdlrP35951 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.66□□□□□ -0.38
LdlrP35951 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.66□□□□□ -0.38
LdlrP35951 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.66□□□□□ -0.38
LdlrP35951 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
LdlrP35951 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LdlrP35951 Gm38223-201ENSMUST00000194484 695 ntBASIC12.66□□□□□ -0.38
LdlrP35951 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.66□□□□□ -0.38
LdlrP35951 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.66□□□□□ -0.38
LdlrP35951 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LdlrP35951 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.66□□□□□ -0.38
LdlrP35951 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.66□□□□□ -0.38
LdlrP35951 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
LdlrP35951 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LdlrP35951 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LdlrP35951 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
LdlrP35951 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LdlrP35951 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
LdlrP35951 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LdlrP35951 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.65□□□□□ -0.38
LdlrP35951 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.65□□□□□ -0.38
LdlrP35951 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.65□□□□□ -0.38
LdlrP35951 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LdlrP35951 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LdlrP35951 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.65□□□□□ -0.38
LdlrP35951 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LdlrP35951 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.65□□□□□ -0.38
LdlrP35951 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
LdlrP35951 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
LdlrP35951 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
LdlrP35951 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.65□□□□□ -0.39
LdlrP35951 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LdlrP35951 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LdlrP35951 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.64□□□□□ -0.39
LdlrP35951 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LdlrP35951 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LdlrP35951 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms