Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.4□□□□□ -0.26
Rfc1P35601 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Rfc1P35601 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.4□□□□□ -0.26
Rfc1P35601 Gm10548-201ENSMUST00000097631 2629 ntBASIC13.4□□□□□ -0.26
Rfc1P35601 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rfc1P35601 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Rfc1P35601 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rfc1P35601 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rfc1P35601 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rfc1P35601 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Rfc1P35601 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rfc1P35601 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.39□□□□□ -0.27
Rfc1P35601 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Gm15240-201ENSMUST00000118156 720 ntBASIC13.39□□□□□ -0.27
Rfc1P35601 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Rfc1P35601 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Rfc1P35601 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.39□□□□□ -0.27
Rfc1P35601 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.39□□□□□ -0.27
Rfc1P35601 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.39□□□□□ -0.27
Rfc1P35601 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.39□□□□□ -0.27
Rfc1P35601 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.39□□□□□ -0.27
Rfc1P35601 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rfc1P35601 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rfc1P35601 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.39□□□□□ -0.27
Rfc1P35601 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.39□□□□□ -0.27
Rfc1P35601 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Rfc1P35601 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfc1P35601 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rfc1P35601 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Rfc1P35601 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfc1P35601 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfc1P35601 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.38□□□□□ -0.27
Rfc1P35601 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfc1P35601 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rfc1P35601 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfc1P35601 Gm44872-201ENSMUST00000207864 420 ntBASIC13.38□□□□□ -0.27
Rfc1P35601 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.38□□□□□ -0.27
Rfc1P35601 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Rfc1P35601 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Rfc1P35601 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.38□□□□□ -0.27
Rfc1P35601 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.38□□□□□ -0.27
Rfc1P35601 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rfc1P35601 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rfc1P35601 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfc1P35601 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfc1P35601 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rfc1P35601 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rfc1P35601 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rfc1P35601 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rfc1P35601 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rfc1P35601 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Rfc1P35601 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms