Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Mmp13P33435 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.01□□□□□ -0.33
Mmp13P33435 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Mmp13P33435 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.01□□□□□ -0.33
Mmp13P33435 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.01□□□□□ -0.33
Mmp13P33435 Gm18062-201ENSMUST00000208020 547 ntBASIC13.01□□□□□ -0.33
Mmp13P33435 Gm18055-201ENSMUST00000208254 547 ntBASIC13.01□□□□□ -0.33
Mmp13P33435 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.01□□□□□ -0.33
Mmp13P33435 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.01□□□□□ -0.33
Mmp13P33435 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.01□□□□□ -0.33
Mmp13P33435 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.01□□□□□ -0.33
Mmp13P33435 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.01□□□□□ -0.33
Mmp13P33435 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Gm25857-201ENSMUST00000082788 129 ntBASIC13.01□□□□□ -0.33
Mmp13P33435 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Mmp13P33435 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Mmp13P33435 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.01□□□□□ -0.33
Mmp13P33435 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Mmp13P33435 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Mmp13P33435 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13□□□□□ -0.33
Mmp13P33435 Gm37324-201ENSMUST00000194500 4504 ntBASIC13□□□□□ -0.33
Mmp13P33435 Gm13050-201ENSMUST00000122149 1345 ntBASIC13□□□□□ -0.33
Mmp13P33435 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13□□□□□ -0.33
Mmp13P33435 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Gm14350-201ENSMUST00000116642 640 ntBASIC13□□□□□ -0.33
Mmp13P33435 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Gm5687-201ENSMUST00000118252 640 ntBASIC13□□□□□ -0.33
Mmp13P33435 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13□□□□□ -0.33
Mmp13P33435 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Mmp13P33435 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Mmp13P33435 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13□□□□□ -0.33
Mmp13P33435 Gm16372-201ENSMUST00000073088 450 ntBASIC13□□□□□ -0.33
Mmp13P33435 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Mmp13P33435 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Mmp13P33435 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.99□□□□□ -0.33
Mmp13P33435 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.99□□□□□ -0.33
Mmp13P33435 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Mmp13P33435 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.99□□□□□ -0.33
Mmp13P33435 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.99□□□□□ -0.33
Mmp13P33435 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Mmp13P33435 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Mmp13P33435 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Mmp13P33435 Gm12390-201ENSMUST00000117897 397 ntBASIC12.99□□□□□ -0.33
Mmp13P33435 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.99□□□□□ -0.33
Mmp13P33435 Gm29649-201ENSMUST00000185649 419 ntBASIC12.99□□□□□ -0.33
Mmp13P33435 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.99□□□□□ -0.33
Mmp13P33435 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.99□□□□□ -0.33
Mmp13P33435 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Mmp13P33435 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.99□□□□□ -0.33
Mmp13P33435 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.99□□□□□ -0.33
Mmp13P33435 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Mmp13P33435 Gm6091-201ENSMUST00000098307 165 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms