Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.94□□□□□ -0.66
Slc6a1P31648 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.94□□□□□ -0.66
Slc6a1P31648 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Gm4875-201ENSMUST00000118257 786 ntBASIC10.94□□□□□ -0.66
Slc6a1P31648 Gm15393-201ENSMUST00000120499 219 ntBASIC10.94□□□□□ -0.66
Slc6a1P31648 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.94□□□□□ -0.66
Slc6a1P31648 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc6a1P31648 Gm16215-201ENSMUST00000161990 637 ntBASIC10.94□□□□□ -0.66
Slc6a1P31648 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc6a1P31648 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Gm33320-201ENSMUST00000192232 530 ntBASIC10.94□□□□□ -0.66
Slc6a1P31648 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc6a1P31648 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.94□□□□□ -0.66
Slc6a1P31648 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.94□□□□□ -0.66
Slc6a1P31648 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.94□□□□□ -0.66
Slc6a1P31648 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc6a1P31648 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc6a1P31648 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.94□□□□□ -0.66
Slc6a1P31648 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Slc6a1P31648 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Slc6a1P31648 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.93□□□□□ -0.66
Slc6a1P31648 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Gm15321-201ENSMUST00000121290 288 ntBASIC10.93□□□□□ -0.66
Slc6a1P31648 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Gm43703-201ENSMUST00000200523 763 ntBASIC10.93□□□□□ -0.66
Slc6a1P31648 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.93□□□□□ -0.66
Slc6a1P31648 Gm5186-201ENSMUST00000218781 920 ntBASIC10.93□□□□□ -0.66
Slc6a1P31648 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Slc6a1P31648 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc6a1P31648 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.92□□□□□ -0.66
Slc6a1P31648 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Slc6a1P31648 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc6a1P31648 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 150.7 ms