Protein–RNA interactions for Protein: P31001

Des, Desmin, mousemouse

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DesP31001 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DesP31001 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
DesP31001 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
DesP31001 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
DesP31001 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
DesP31001 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
DesP31001 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.15□□□□□ -0.3
DesP31001 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.15□□□□□ -0.3
DesP31001 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
DesP31001 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.15□□□□□ -0.3
DesP31001 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
DesP31001 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
DesP31001 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
DesP31001 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
DesP31001 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
DesP31001 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
DesP31001 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.15□□□□□ -0.3
DesP31001 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.15□□□□□ -0.3
DesP31001 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.15□□□□□ -0.3
DesP31001 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.15□□□□□ -0.3
DesP31001 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.15□□□□□ -0.3
DesP31001 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
DesP31001 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.15□□□□□ -0.3
DesP31001 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
DesP31001 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Dopey2-207ENSMUST00000227156 7340 ntBASIC13.15□□□□□ -0.3
DesP31001 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
DesP31001 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
DesP31001 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
DesP31001 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.15□□□□□ -0.31
DesP31001 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
DesP31001 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
DesP31001 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
DesP31001 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.14□□□□□ -0.31
DesP31001 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
DesP31001 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Mir686-201ENSMUST00000102174 109 ntBASIC13.14□□□□□ -0.31
DesP31001 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.14□□□□□ -0.31
DesP31001 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.14□□□□□ -0.31
DesP31001 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.14□□□□□ -0.31
DesP31001 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.14□□□□□ -0.31
DesP31001 Gm6745-201ENSMUST00000199216 526 ntBASIC13.14□□□□□ -0.31
DesP31001 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.14□□□□□ -0.31
DesP31001 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.14□□□□□ -0.31
DesP31001 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
DesP31001 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.14□□□□□ -0.31
DesP31001 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
DesP31001 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DesP31001 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.13□□□□□ -0.31
DesP31001 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
DesP31001 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms