Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
VimP20152 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.88□□□□□ -0.35
VimP20152 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.88□□□□□ -0.35
VimP20152 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.88□□□□□ -0.35
VimP20152 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.88□□□□□ -0.35
VimP20152 Mir8117-201ENSMUST00000184773 107 ntBASIC12.88□□□□□ -0.35
VimP20152 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.88□□□□□ -0.35
VimP20152 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VimP20152 Psmb5-202ENSMUST00000227257 622 ntBASIC12.88□□□□□ -0.35
VimP20152 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.88□□□□□ -0.35
VimP20152 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.88□□□□□ -0.35
VimP20152 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
VimP20152 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VimP20152 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
VimP20152 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VimP20152 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.87□□□□□ -0.35
VimP20152 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.87□□□□□ -0.35
VimP20152 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VimP20152 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
VimP20152 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
VimP20152 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.87□□□□□ -0.35
VimP20152 Gm9727-201ENSMUST00000161387 555 ntBASIC12.87□□□□□ -0.35
VimP20152 Gm9630-201ENSMUST00000178304 885 ntBASIC12.87□□□□□ -0.35
VimP20152 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Gm27772-201ENSMUST00000184900 187 ntBASIC12.87□□□□□ -0.35
VimP20152 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.87□□□□□ -0.35
VimP20152 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.87□□□□□ -0.35
VimP20152 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.87□□□□□ -0.35
VimP20152 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.87□□□□□ -0.35
VimP20152 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.87□□□□□ -0.35
VimP20152 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VimP20152 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.87□□□□□ -0.35
VimP20152 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VimP20152 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VimP20152 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
VimP20152 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
VimP20152 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
VimP20152 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VimP20152 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.86□□□□□ -0.35
VimP20152 Gm9229-201ENSMUST00000222777 126 ntBASIC12.86□□□□□ -0.35
VimP20152 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.86□□□□□ -0.35
VimP20152 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.86□□□□□ -0.35
VimP20152 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
VimP20152 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VimP20152 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VimP20152 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms