Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Fn1P11276 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC9.69□□□□□ -0.86
Fn1P11276 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Fn1P11276 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Fn1P11276 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.69□□□□□ -0.86
Fn1P11276 Gm5555-201ENSMUST00000120352 1111 ntBASIC9.69□□□□□ -0.86
Fn1P11276 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Gm24248-201ENSMUST00000157321 322 ntBASIC9.69□□□□□ -0.86
Fn1P11276 Gm7211-201ENSMUST00000172692 1118 ntBASIC9.69□□□□□ -0.86
Fn1P11276 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.69□□□□□ -0.86
Fn1P11276 Gm5870-201ENSMUST00000196461 282 ntBASIC9.69□□□□□ -0.86
Fn1P11276 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.69□□□□□ -0.86
Fn1P11276 Gm26448-201ENSMUST00000082446 203 ntBASIC9.69□□□□□ -0.86
Fn1P11276 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Fn1P11276 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Fn1P11276 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Fn1P11276 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Fn1P11276 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fn1P11276 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Fn1P11276 Gm14921-201ENSMUST00000118643 908 ntBASIC9.68□□□□□ -0.86
Fn1P11276 Gm11836-201ENSMUST00000121022 441 ntBASIC9.68□□□□□ -0.86
Fn1P11276 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.68□□□□□ -0.86
Fn1P11276 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.68□□□□□ -0.86
Fn1P11276 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.68□□□□□ -0.86
Fn1P11276 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.68□□□□□ -0.86
Fn1P11276 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.68□□□□□ -0.86
Fn1P11276 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Gm14213-201ENSMUST00000119778 768 ntBASIC9.68□□□□□ -0.86
Fn1P11276 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.68□□□□□ -0.86
Fn1P11276 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.68□□□□□ -0.86
Fn1P11276 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.68□□□□□ -0.86
Fn1P11276 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Fn1P11276 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC9.68□□□□□ -0.86
Fn1P11276 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Fn1P11276 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Fn1P11276 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fn1P11276 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Fn1P11276 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Fn1P11276 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Fn1P11276 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.67□□□□□ -0.86
Fn1P11276 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms