Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Gm23949-201ENSMUST00000104027 127 ntBASIC11.19□□□□□ -0.62
Ccl3P10855 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl3P10855 Gm15711-201ENSMUST00000118889 535 ntBASIC11.19□□□□□ -0.62
Ccl3P10855 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl3P10855 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl3P10855 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccl3P10855 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccl3P10855 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl3P10855 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.19□□□□□ -0.62
Ccl3P10855 Gm9211-201ENSMUST00000182882 975 ntBASIC11.19□□□□□ -0.62
Ccl3P10855 Gm3508-201ENSMUST00000186012 792 ntBASIC11.19□□□□□ -0.62
Ccl3P10855 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccl3P10855 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccl3P10855 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.19□□□□□ -0.62
Ccl3P10855 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccl3P10855 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ccl3P10855 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Ccl3P10855 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Acot6-202ENSMUST00000222921 3622 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ccl3P10855 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ccl3P10855 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Ccl3P10855 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ccl3P10855 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm15703-201ENSMUST00000120250 880 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.18□□□□□ -0.62
Ccl3P10855 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm5616-201ENSMUST00000165252 384 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Gm8741-201ENSMUST00000174736 384 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm28071-201ENSMUST00000190355 478 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Gm9555-201ENSMUST00000200908 583 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.18□□□□□ -0.62
Ccl3P10855 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ccl3P10855 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.18□□□□□ -0.62
Ccl3P10855 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccl3P10855 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ccl3P10855 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.18□□□□□ -0.62
Ccl3P10855 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccl3P10855 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Ccl3P10855 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccl3P10855 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccl3P10855 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ccl3P10855 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms